Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 09/2016 |  | Carlos Ruíz | FW |  | CSD Municipal | Municipal |
| 09/2016 |  | Paxton Pomykal | MF |  | FC Dallas (Preseason) | FC Dallas (Preseason) |
| 08/2016 |  | Norberto Paparatto | DF | |||
| 07/2016 |  | Getterson Alves | FW |  | J. Malucelli - PR | J.Malucelli |
| 05/2016 |  | Aubrey David | DF |  | Deportivo Saprissa | Saprissa |
| 05/2016 | | Agustín Jara | DF | |||
| 03/2016 | | Colin Bonner | FW | |||
| 02/2016 | | Ryan Herman | GK | |||
| 02/2016 |  | Timo Pitter | MF |  | OKC Energy FC | OKC Energy |
| 02/2016 | | Mauro Rosales | MF |  | Vancouver Whitecaps | Vancouver |
| 02/2016 |  | Carlos Lizarazo | MF |  | Cruz Azul | Cruz Azul |
| 01/2016 |  | Maynor Figueroa | DF |  | Colorado Rapids | Colorado Rapids |
| 01/2016 |  | Carlos Gruezo | MF |  | VfB Stuttgart | Stuttgart |
| 01/2016 | | Juan Ortiz | MF | |||
| 01/2016 |  | Aaron Guillen | DF | |||
| 01/2016 |  | Erik Mozzo | GK | |||
| 01/2016 | | Jamie Browne | FW |  | UWS Upsetters SC | UWS Upsetters SC |
| 01/2016 | | Maxi Urruti | FW |  | Portland Timbers | Portland |
| 01/2016 | | Tracy Coleman | AT-C |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 08/2016 | | Fabian Castillo | FW |  | Trabzonspor | Trabzon |
| 07/2016 | | Alejandro Zendejas | MF |  | Deportivo Guadalajara | CD Guadalajara |
| 06/2016 | | Timo Pitter | MF | | OKC Energy FC | OKC Energy |
| 03/2016 |  | Je-Vaughn Watson | DF |  | New England Revolution | New Engl. |
| 02/2016 |  | Blas Pérez | FW | | Vancouver Whitecaps | Vancouver |
| 01/2016 | | Dan Kennedy | GK |  | Los Angeles Galaxy | L.A. Galaxy |
| 01/2016 |  | David Texeira | FW |  | Sivasspor | Sivasspor |