Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 11/2016 |  | Michael Dellorusso | AS-CO |  | Rio Grande Valley FC | RGV FC |
| 10/2016 |  | Wilmer Cabrera | MA | | Rio Grande Valley FC | RGV FC |
| 09/2016 |  | Callum Irving | GK | |||
| 09/2016 | | Devin Perales | GK | |||
| 09/2016 | | Kevin Garcia | DF | | Rio Grande Valley FC | RGV FC |
| 08/2016 |  | Keyner Brown | DF |  | CS Herediano | CS Herediano |
| 08/2016 |  | José Escalante | MF | | Rio Grande Valley FC | RGV FC |
| 07/2016 | | Yair Arboleda | MF |  | Santa Fe | Santa Fe |
| 07/2016 | | Eric Alexander | MF |  | CF Montréal | Montréal |
| 07/2016 |  | Charlie Ward | MF | |||
| 07/2016 | | Chris Rumsey | AT-C | |||
| 06/2016 | | T.J. Casner | FW | |||
| 06/2016 | | Wade Barrett | MA | |||
| 04/2016 | | Collen Warner | MF | | Rio Grande Valley FC | RGV FC |
| 02/2016 |  | Kenny Mansally | DF |  | Real Salt Lake | Salt Lake |
| 01/2016 |  | Agus | DF |  | Albacete | Albacete |
| 01/2016 | | Rocha | MF |  | Gimnàstic de Tarragona | Nàstic |
| 01/2016 | | Sebastien Ibeagha | DF | | Rio Grande Valley FC | RGV FC |
| 01/2016 | | Jalil Anibaba | DF | |||
| 01/2016 | | Calle Brown | GK |  | Pittsburgh Riverhounds | Pittsburgh Riverhounds |
| 01/2016 | | Bradley Bourgeois | DF |  | Tulsa Golden Hurricane | Tulsa Golden Hurricane |
| 01/2016 |  | Cristian Maidana | MF |  | Philadelphia Union | Philadelphia |
| 01/2016 | | Andrew Wenger | MF | | Philadelphia Union | Philadelphia |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 09/2016 |  | Érick Torres | FW |  | Cruz Azul | Cruz Azul |
| 07/2016 |  | Giles Barnes | FW |  | Vancouver Whitecaps | Vancouver |
| 07/2016 | | Leonel Miranda | MF |  | Defensa y Justicia | CSyD DyJ |
| 06/2016 |  | Owen Coyle | MA |  | Blackburn Rovers | Blackburn |
| 01/2016 | | Brad Davis | MF |  | Sporting Kansas City | Kansas City |
| 01/2016 | | Jermaine Taylor | DF |  | Portland Timbers | Portland |
| 01/2016 | | Luis Garrido | MF |  | CD Olimpia | CD Olimpia |
| 01/2016 | | Alex López | MF | | CD Olimpia | CD Olimpia |
| 01/2016 | | Nathan Sturgis | MF |  | Seattle Sounders | Seattle SFC |
| 01/2016 | | Chandler Hoffman | FW |  | Louisville City FC | LouCity |