Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 05/2013 |  | Roman Skuhravý | MA | |||
| 05/2013 | | Pavel Drsek | AS-CO |  | FK Jablonec B | FK Jablonec B |
| 02/2013 | | Jan Pázler | FW |  | FK Dukla Praha | Dukla Praha |
| 01/2013 | | Michal Hubník | FW |  | Sigma Olomouc | Olomouc |
| 01/2013 |  | Daniel Rossi | MF | | Sigma Olomouc | Olomouc |
| 01/2013 | | Vilém Fendrich | GK | | FK Jablonec B | FK Jablonec B |
| 07/2012 | | Martin Krásný | GK | | FK Jablonec B | FK Jablonec B |
| 07/2012 | | Marek Kysela | DF |  | Inter U19 | Inter U19 |
| 07/2012 | | Dominik Simerský | DF |  | FC Zbrojovka Brno | Zbrojovka Brno |
| 07/2012 | | Tomáš Čížek | MF | |||
| 07/2012 | | Jiří Valenta | MF |  | Viktoria Žižkov | V. Žižkov |
| 07/2012 | | Lukáš Zoubele | MF |  | FK Teplice | FK Teplice |
| 07/2012 |  | Milan Vukovič | FW |  | FC Sellier & Bellot Vlašim | FC Sellier & Bellot Vlašim |
| 07/2012 | | Václav Kotal | MA |  | FC Hradec Králové | Hradec Králové |
| 07/2012 | | Michal Šmarda | AS-CO | |||
| 07/2012 | | Jan Stejskal | GK-CO |  | Sparta Prague | Sparta Prague |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 02/2013 |  | Anes Haurdič | MF |  | FK Sarajevo | FK Sarajevo |
| 01/2013 | | Dominik Simerský | DF | | FC Hradec Králové | Hradec Králové |
| 01/2013 | | Jan Kovařík | MF |  | Viktoria Plzeň | Viktoria Plzeň |
| 01/2013 | | David Lafata | FW | | Sparta Prague | Sparta Prague |
| 01/2013 | | Milan Vukovič | FW |  | Bonner SC | Bonner SC |
| 08/2012 | | Jiří Valenta | MF |  | 1. FC Slovácko | 1. FC Slovácko |
| 07/2012 | | Marek Jarolím | MF | | FK Teplice | FK Teplice |
| 07/2012 | | Muris Mešanović | FW |  | Vysočina Jihlava | Jihlava |
| 07/2012 | | Jan Vošahlík | FW |  | Slavia Praha | Slavia Praha |
| 07/2012 | | František Komňacký | MA | | Vysočina Jihlava | Jihlava |