Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 07/2008 |  | Jiří Bobok | GK |  | FK Jablonec | FK Jablonec |
| 07/2008 |  | Joslain Mayebi | GK |  | FC Metz | Metz |
| 07/2008 |  | Ivailo Petrov | GK |  | CSKA Sofia | CSKA Sofia |
| 07/2008 |  | Demetris Daskalakis | DF |  | APOEL Nikosia | APOEL |
| 07/2008 | | Marios Georgiou | DF | |||
| 07/2008 | | Orthodoxos Ioannou | DF |  | Nea Salamina | Nea Salamina |
| 07/2008 | | Pierakis Kastanas | DF | |||
| 07/2008 |  | Nélson Veiga | DF |  | Omonia Nikosia | Omonia Nikosia |
| 07/2008 | | Martin Abrahám | MF |  | Slavia Praha | Slavia Praha |
| 07/2008 |  | Ednilson | MF |  | Partizan | Partizan |
| 07/2008 |  | Alejandro Gavatorta | MF |  | FC Thun Berner Oberland | FC Thun |
| 07/2008 |  | Dejan Ilić | MF | |||
| 07/2008 |  | Marcelo Costa | MF |  | Metropolitano - SC | Metropolitano |
| 07/2008 |  | Erez Mesika | MF |  | Maccabi Tel Aviv | M. Tel Aviv |
| 07/2008 |  | Hamid Rhanem | MF |  | Enosis Neon Paralimni | EN Paralimni |
| 07/2008 | | Dionísio | FW |  | Stade Tunisien | Stade Tunisien |
| 07/2008 |  | Joshua Izuchukwu | FW | |||
| 07/2008 | | Michalis Konstantinidis | FW | |||
| 07/2008 | | Marios Koutouris | FW | |||
| 07/2008 | | Magno | FW | | Omonia Nikosia | Omonia Nikosia |
| 07/2008 | | Joseph Obinna | FW |  | OFI Heraklion | OFI |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 09/2008 | | Alejandro Gavatorta | MF |  | Politehnica Iasi | Poli Iasi |
| 07/2008 | | Sofronis Avgousti | GK |  | Apollon Limassol | Apollon Limass. |
| 07/2008 | | Paraskevas Christou | DF | | APOEL Nikosia | APOEL |
| 07/2008 |  | Dimitris Maris | DF | | Omonia Nikosia | Omonia Nikosia |
| 07/2008 |  | José Rey | DF |  | Caracas FC | Caracas FC |
| 07/2008 |  | Charles Akonnor | MF |  | SC Langenhagen | SC Langenhagen |
| 07/2008 | | Sunny Ekeh | FW |  | FK Stal Kamjanske | FK Stal |
| 07/2008 | | Marios Neophytou | FW | | Nea Salamina | Nea Salamina |
| 07/2008 | | Nir Klinger | MA |  | Pafos FC | Pafos FC |
| 06/2008 | | Ivica Francišković | MF |  | FK Grbalj Radanovići | FK Grbalj |
| 01/2008 |  | Edgaras Jankauskas | FW |  | Os Belenenses | Belenenses |
| 01/2008 | | Azubuike Oliseh | MF |  | KSV Roeselare | Roeselare |
| 01/2008 |  | Vítor Rodrigues | DF |  | ASIL Lysi | ASIL Lysi |
| 01/2008 |  | Klimenti Tsitaishvili | FW |  | Anorthosis Famagusta | Anorthosis |