Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 01/2000 |  | Atanas Georgiev | MF |  | 1. FC Lok Stendal | Lok Stendal |
| 01/2000 |  | Jürgen Bogs | MA | |||
| 11/1999 |  | Denis Koslov | FW |  | Rot-Weiß Erfurt | Erfurt |
| 07/1999 | | Matthias Oette | GK | |||
| 07/1999 | | Nico Thomaschewski | GK |  | 1. FC Union Berlin | Union Berlin |
| 07/1999 |  | Peter Biro | DF | |||
| 07/1999 |  | Tolga Günes | DF |  | SD Croatia Berlin | Croatia Berlin |
| 07/1999 | | Jens Reckmann | DF |  | Dynamo Dresden | Dresden |
| 07/1999 | | Philipp Wanski | DF | |||
| 07/1999 | | Maximilian Wolchow | DF | |||
| 07/1999 |  | Milan Duhan | MF |  | MFK Karviná | MFK Karviná |
| 07/1999 |  | Matthias Predojević | MF | |||
| 07/1999 | | Dirk Rehbein | MF |  | TeBe Berlin | TeBe Berlin |
| 07/1999 | | Thorsten Boer | FW | | 1. FC Union Berlin | Union Berlin |
| 07/1999 | | Lars Leps | FW | |||
| 07/1999 | | Marcel Riediger | FW | |||
| 07/1999 | | André Schmeißer | FW | |||
| 07/1999 | | Norman Struck | FW | | 1. FC Union Berlin | Union Berlin |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 11/1999 | | Heiko Brestrich | MF |  | 1. FC Lok Leipzig | Lok Leipzig |
| 07/1999 | | Ayhan Gezen | MF | | Rot-Weiß Erfurt | Erfurt |
| 07/1999 | | Davor Krznaric | MF |  | SV Babelsberg 03 | Babelsberg |
| 07/1999 | | Bernd Jopek | FW |  | VfB Einheit zu Pankow 1893 | VfB Pankow |
| 07/1999 | | Timo Lesch | FW |  | 1. FC Magdeburg | Magdeburg |
| 07/1999 | | Sven Ohly | FW | | SV Babelsberg 03 | Babelsberg |