Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 07/2012 |  | Christian Ibeagha | DF |  | North Carolina Fusion U23 | North Carolina Fusion U23 |
| 07/2012 |  | Chris Nurse | MF | |||
| 07/2012 | | Pari Pantazopoulos | DF |  | Chicago Fire | Chicago Fire |
| 03/2012 |  | Eddie Edward | DF | |||
| 01/2012 | | Anthony Vázquez | DF | |||
| 01/2012 | | Christian Barreiro | MF | |||
| 01/2012 |  | Yaw Danso | MF | |||
| 01/2012 |  | Stephen DeRoux | MF | |||
| 01/2012 |  | Justin Fojo | MF |  | Orlando City | Orlando City |
| 01/2012 |  | Jackie Marrero | MF |  | Conquistadores de Guaynabo | Conquistadores de Guaynabo |
| 01/2012 | | Andres Perez | MF |  | Sevilla FC Puerto Rico | Sevilla FC Puerto Rico |
| 01/2012 |  | Jonathan Faña | FW |  | W Connection FC | W Connection FC |
| 01/2012 |  | Junior Sandoval | FW |  | Atlanta Silverbacks | Silverbacks FC |
| 01/2012 | | Petter Villegas | FW |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 07/2012 | | Junior Sandoval | FW |  | CD Marathón | CD Marathón |
| 01/2012 | | Logan Emory | DF |  | Toronto FC | Toronto FC |
| 01/2012 |  | Leonardo Ly | MF |  | AD San Carlos | San Carlos |