Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 03/2017 |  | Míchel | MA | |||
| 01/2017 | | José Rodríguez | MF |  | 1. FSV Mainz 05 | Mainz 05 |
| 01/2017 | | Luis Hernández | DF |  | Leicester City | Leicester |
| 01/2017 |  | Martín Demichelis | DF |  | RCD Espanyol | RCD Espanyol |
| 01/2017 |  | Adalberto Peñaranda | FW |  | Udinese Calcio | Udinese |
| 12/2016 | | Sergio Pellicer | AS-CO |  | Málaga CF U19 | Málaga U19 |
| 11/2016 |  | Kuki Zalazar | FW | | Málaga CF U19 | Málaga U19 |
| 10/2016 | | Luis Muñoz | DF | | Málaga CF U19 | Málaga U19 |
| 08/2016 |  | Denis Boyko | GK |  | Beşiktaş | Beşiktaş |
| 08/2016 |  | Youssef En-Nesyri | FW |  | Atlético Malagueño | Atlético Malagueño |
| 07/2016 | | Llorente | DF |  | Real Madrid | Real Madrid |
| 07/2016 | | Michael Santos | FW |  | River Plate | River Plate |
| 07/2016 |  | Bakary Koné | DF |  | Olympique Lyonnais | Lyonnais |
| 07/2016 | | Mikel Villanueva | DF | | Atlético Malagueño | Atlético Malagueño |
| 07/2016 |  | Fábio Espinho | MF |  | Moreirense FC | Moreirense |
| 07/2016 | | Jony | MF |  | Sporting Gijón | Sporting Gijón |
| 07/2016 | | Keko | MF |  | SD Eibar | Eibar |
| 07/2016 |  | Zdravko Kuzmanović | MF | | Udinese Calcio | Udinese |
| 07/2016 | | Sandro | FW |  | FC Barcelona | Barcelona |
| 07/2016 | | Adnane Tighadouini | FW |  | Kayserispor | Kayserispor |
| 07/2016 | | Juande Ramos | MA | |||
| 07/2016 | | Paco Ruiz | GK-CO | |||
| 07/2016 | | Jose Antonio Lizana | RE-C |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 08/2016 | | Adnane Tighadouini | FW |  | Vitesse | Vitesse |
| 07/2016 |  | Guillermo Ochoa | GK |  | Granada CF | Granada CF |
| 07/2016 | | Fábio Espinho | MF |  | Boavista | Boavista |
| 07/2016 | | Cifuentes | MF |  | Girona FC | Girona |
| 07/2016 | | Ricardo Horta | FW |  | S.C. Braga | S.C. Braga |
| 07/2016 | | Raúl Albentosa | DF |  | Derby County | Derby |
| 07/2016 | | Hachim Mastour | MF |  | AC Milan U19 | AC Milan U19 |
| 07/2016 |  | Christian Atsu | FW |  | Chelsea FC | Chelsea |
| 07/2016 |  | Duje Čop | FW |  | Cagliari Calcio | Cagliari |
| 07/2016 |  | Roque Santa Cruz | FW |  | Club Olimpia | Olimpia |
| 07/2016 |  | Ikechukwu Uche | FW |  | UANL Tigres | Tigres |
| 07/2016 | | Javi Gracia | MA |  | Rubin Kazan | Kazan |
| 07/2016 | | Iñigo Arteaga | GK-CO | | Rubin Kazan | Kazan |