Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 06/2012 |  | Filippos Bolovinis | GK-CO |  | PAS Giannina | PAS Giannina |
| 01/2012 |  | Mano | DF |  | Villarreal CF B | Villarreal B |
| 01/2012 |  | Jackson Mendy | DF |  | AC Ajaccio | AC Ajaccio |
| 01/2012 |  | Chumbinho | MF |  | OFI Heraklion | OFI |
| 01/2012 | | Dimitrios Papadopoulos | FW |  | Celta de Vigo | Celta de Vigo |
| 09/2011 |  | Petar Grbić | MF | |||
| 08/2011 |  | Agustín Viana | MF |  | Bella Vista | Bella Vista |
| 07/2011 | | Xavier Tomas | DF |  | Olympiakos Volou | Olymp. Volou |
| 07/2011 | | Dimitrios Ioannou | DF |  | AO Kerkyra | AO Kerkyra |
| 07/2011 | | Vangelis Koutsopoulos | DF |  | AEL Limassol | AEL Limassol |
| 07/2011 | | Manolis Nikolakakis | DF | |||
| 07/2011 |  | Lucas Favalli | MF |  | Atromitos | Atromitos |
| 07/2011 | | Panagiotis Korbos | MF |  | AO Trikala | Trikala |
| 07/2011 | | Paschalis Melissas | MF | | Atromitos | Atromitos |
| 07/2011 |  | Stefano Napoleoni | MF | |||
| 07/2011 | | Alan Sánchez | MF |  | Boca Unidos | Boca Unidos |
| 07/2011 |  | Ivan Tasić | MF | |||
| 07/2011 |  | Thierry Zahui | MF |  | Chicago Fire Academy | Chicago Fire Academy |
| 07/2011 | | Georgios Bountopoulos | FW | |||
| 07/2011 |  | Zdravko Popović | FW | | Atromitos | Atromitos |
| 07/2011 | | Petros Zouroudis | FW |  | Diagoras FC | Diagoras FC |
| 07/2011 | | Georgios Paraschos | MA |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 04/2012 | | Alan Sánchez | MF |  | Manta | Manta |
| 01/2012 | | Ivan Tasić | MF |  | BSK Borča | BSK Borča |
| 01/2012 |  | Patrick Dimbala | FW |  | Panionios GSS | Panionios |
| 07/2011 | | Georgios Barkoglou | MF | | AO Kerkyra | AO Kerkyra |
| 07/2011 | | Vincent Ramaël | FW |  | Royal Géants Athois | Royal Géants Athois |