Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 07/2009 |  | Mantas Galdikas | GK | |||
| 07/2009 |  | Janusz Bucholc | DF |  | Wigry Suwałki | Wigry Suwałki |
| 07/2009 |  | Bertrand Ngapounou | DF |  | Tauras Tauragė | Tauras Tauragė |
| 05/2009 | | Tomas Mikuckis | DF |  | FK Sūduva | FK Sūduva |
| 01/2009 | | Marius Šalkauskas | GK | |||
| 01/2009 | | Denis Gordej | DF |  | FK Vilnius | FK Vilnius |
| 01/2009 | | Paulius Macevičius | DF | |||
| 01/2009 | | Tomas Stakevičius | DF | |||
| 01/2009 | | Marius Stanaitis | DF | |||
| 01/2009 |  | Aleksandr Volodin | DF |  | FC TVMK | TVMK |
| 01/2009 | | Anton Zuj | DF | |||
| 01/2009 |  | Georgy Bochev | MF |  | TP-47 Tornio | TP-47 Tornio |
| 01/2009 | | Algirdas Breikštas | MF | |||
| 01/2009 | | Tadas Eliošius | MF | |||
| 01/2009 | | Gediminas Kruša | MF | |||
| 01/2009 | | Nikolai Mašitšev | MF | | FC TVMK | TVMK |
| 01/2009 | | Jevgenij Moroz | MF | |||
| 01/2009 | | Viktor Pašin | MF | |||
| 01/2009 | | Tomas Ražanauskas | MF |  | FK Žalgiris | Žalgiris |
| 01/2009 | | Vilius Zabarauskas | MF | |||
| 01/2009 | | Artūras Žulpa | MF | |||
| 01/2009 | | Artjom Dmitrijev | FW | | FC TVMK | TVMK |
| 01/2009 | | Mindaugas Grigalevičius | FW |  | FBK Kaunas | FBK Kaunas |
| 01/2009 | | Tautvydas Svelna | FW |  | FK Ekranas | Ekranas |
| 01/2009 | | Nerijus Vasiliauskas | FW | | FK Žalgiris | Žalgiris |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 07/2009 | | Artjom Dmitrijev | FW |  | JK Narva Trans | Narva Trans |
| 03/2009 | | Aleksandr Volodin | DF | | JK Narva Trans | Narva Trans |
| 01/2009 |  | Roman Smishko | GK |  | MFK Mikolaiv | Mykolaiv |
| 01/2009 | | Vaidas Žutautas | GK |  | Banga Gargždai | Banga |
| 01/2009 | | Marius Kazlauskas | DF |  | FK Atlantas | Atlantas |
| 01/2009 | | Egidijus Majus | DF | | FK Ekranas | Ekranas |
| 01/2009 | | Gediminas Butrimavicius | MF |  | Atlantis FC | Atlantis FC |
| 01/2009 |  | Dejan Milosevski | MF |  | Widzew Łódź | Widzew Łódź |
| 01/2009 | | Evaldas Razulis | FW | | FBK Kaunas | FBK Kaunas |
| 01/2009 | | Aleksandar Toleski | FW |  | FK Teteks | Teteks |