Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 05/2013 |  | Karel Kodeš | MF | |||
| 04/2013 |  | Lukáš Janič | MF |  | Zlaté Moravce | Zlaté Moravce |
| 01/2013 |  | Francis Litsingi | FW |  | Kecskeméti TE | KTE |
| 01/2013 | | Jan Filip | DF | |||
| 01/2013 | | Josef Kaufman | DF |  | FC Zbrojovka Brno | Zbrojovka Brno |
| 01/2013 | | Marek Strada | MF | |||
| 10/2012 | | Michael Lüftner | DF |  | FK Teplice B | FK Teplice B |
| 10/2012 | | Zdeněk Ščasný | MA | |||
| 09/2012 |  | Andrej Kerič | FW | |||
| 08/2012 | | Jakub Podaný | MF |  | Sparta Prague | Sparta Prague |
| 07/2012 | | Jan Hošek | DF |  | KS Cracovia | KS Cracovia |
| 07/2012 | | David Jablonský | DF |  | FK Ústí nad Labem | Ústí nad Labem |
| 07/2012 | | Ján Chovanec | MF |  | MFK Ružomberok | MFK Ružomberok |
| 07/2012 | | Marek Jarolím | MF |  | FK Jablonec | FK Jablonec |
| 07/2012 | | Tomáš Jursa | MF |  | MFK Karviná | MFK Karviná |
| 07/2012 |  | Alen Melunović | FW |  | FK Varnsdorf | FK Varnsdorf |
| 07/2012 | | Pavel Moulis | FW | | FK Ústí nad Labem | Ústí nad Labem |
| 07/2012 | | Richard Veverka | FW | | FK Ústí nad Labem | Ústí nad Labem |
| 07/2012 | | Lukáš Přerost | MA | |||
| 07/2012 | | Patrik Kolář | GK-CO |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 02/2013 | | Marek Jarolím | MF |  | Zhejiang Professional | Zhejiang FC |
| 02/2013 | | Alen Melunović | FW |  | FK Sarajevo | FK Sarajevo |
| 01/2013 | | Petr Dolejš | MF |  | FC Táborsko | FC Táborsko |
| 01/2013 | | Jan Hošek | DF |  | FK Baník Sokolov | Banik Sokolov |
| 01/2013 | | Václav Ježdík | DF |  | Dynamo České Budějovice | Č. Budějovice |
| 08/2012 | | Pavel Moulis | FW | | FK Ústí nad Labem | Ústí nad Labem |
| 08/2012 | | Richard Veverka | FW | | FK Ústí nad Labem | Ústí nad Labem |
| 08/2012 | | Matej Siva | DF |  | Spartak Myjava | Spartak Myjava |
| 07/2012 | | Petr Pechatý | GK |  | SK Roudnice nad Labem | SK Roudnice nad Labem |
| 07/2012 | | Michal Smejkal | DF |  | FK Mladá Boleslav | Ml. Boleslav |
| 07/2012 | | David Kalivoda | MF |  | FK Příbram | FK Příbram |
| 07/2012 | | Vlastimil Stožický | MF |  | Spartak Trnava | Spartak Trnava |
| 07/2012 | | Zdeněk Volek | MF | | FK Ústí nad Labem | Ústí nad Labem |
| 07/2012 | | Lukáš Zoubele | MF | | FK Jablonec | FK Jablonec |
| 07/2012 | | Abid Mujagič | FW |  | FK Baník Most | Baník Most |
| 07/2012 | | Petr Rada | MA |  | Slavia Praha | Slavia Praha |