Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 01/2009 |  | Donatas Navikas | MF |  | Salyut Belgorod | Belgorod |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 01/2009 | | Andrius Strukas | GK |  | FBK Kaunas | FBK Kaunas |
| 01/2009 | | Giedrius Klevinskas | DF |  | FK Sūduva | FK Sūduva |
| 01/2009 | | Andrius Sanajevas | DF | | FBK Kaunas | FBK Kaunas |
| 01/2009 | | Paulius Vaikasas | DF | | FBK Kaunas | FBK Kaunas |
| 01/2009 |  | Muharem Bajrami | MF | | FBK Kaunas | FBK Kaunas |
| 01/2009 |  | Pavel Kovachev | MF |  | CSKA Sofia | CSKA Sofia |
| 01/2009 | | Vladas Petkevičius | MF |  | Atletas Kaunas | Atletas Kaunas |
| 01/2009 | | Gediminas Vičius | MF | | FBK Kaunas | FBK Kaunas |
| 01/2009 | | Eimantas Marozas | FW |  | FK Šiauliai | Šiauliai |
| 01/2009 | | Tadas Straleckas | FW |  | Tauras Tauragė | Tauras Tauragė |
| 07/2008 | | Audrius Juozaitis | DF | | FBK Kaunas | FBK Kaunas |
| 07/2008 | | Mindaugas Valančius | MF | | Atletas Kaunas | Atletas Kaunas |
| 07/2008 |  | Petru Stînga | FW | | FBK Kaunas | FBK Kaunas |
| 07/2008 | | Nerijus Valskis | FW | | FBK Kaunas | FBK Kaunas |
| 07/2008 | | Evgenijus Riabovas | MA | | FBK Kaunas | FBK Kaunas |