Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 02/2007 |  | Jan Vošahlík | FW |  | FK Příbram | FK Příbram |
| 02/2007 | | Jiří Homola | DF |  | Sparta Prague | Sparta Prague |
| 01/2007 | | Jan Flachbart | DF |  | Sigma Olomouc | Olomouc |
| 01/2007 | | Jan Svátek | FW |  | Dynamo České Budějovice | Č. Budějovice |
| 01/2007 | | Jan Šisler | DF | |||
| 01/2007 |  | David Prochazka | MF | |||
| 01/2007 |  | Róbert Zeher | FW |  | 1. FC Slovácko | 1. FC Slovácko |
| 09/2006 | | Milan Fukal | DF |  | Bor. Mönchengladbach | M'gladbach |
| 07/2006 | | Miroslav Hozda | DF | |||
| 07/2006 | | Jakub Adam | MF | |||
| 07/2006 | | Pavel Eliáš | MF |  | Slavia Praha | Slavia Praha |
| 07/2006 | | Adam Hloušek | MF | |||
| 07/2006 | | Luboš Loučka | MF | | Sparta Prague | Sparta Prague |
| 07/2006 | | Pavel Patka | MF | |||
| 07/2006 | | Jaroslav Peškar | MF | |||
| 07/2006 | | Milan Petržela | MF | | 1. FC Slovácko | 1. FC Slovácko |
| 07/2006 | | Jiří Valenta | MF |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 02/2007 | | Josef Jindřišek | DF | | Sigma Olomouc | Olomouc |
| 01/2007 | | David Lafata | FW |  | Austria Wien | Austria Wien |
| 01/2007 | | Štěpán Kučera | DF | | Sparta Prague | Sparta Prague |
| 10/2006 | | Luboš Hušek | MF | | Sparta Prague | Sparta Prague |
| 09/2006 | | Vladimír Pončák | DF |  | SK Kladno | SK Kladno |
| 07/2006 | | Karel Vrabec | DF |  | FK Jablonec B | FK Jablonec B |
| 07/2006 | | Tomáš Glos | MF |  | FK Baník Sokolov | Banik Sokolov |
| 07/2006 | | Petr Musil | MF |  | Inter Bratislava | Inter Brat. |
| 07/2006 | | Jiří Vágner | MF |  | Bohemians Praha 1905 | Bohemians |
| 07/2006 | | Jan Svátek | FW | | Dynamo České Budějovice | Č. Budějovice |