Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 02/2007 |  | Alberto Bigon | MA | |||
| 02/2007 |  | Jamal Alioui | DF |  | FC Crotone | Crotone |
| 02/2007 |  | Obinna Nwaneri | DF |  | Espérance de Tunis | Espérance |
| 11/2006 |  | Gabet Chapuisat | MA | |||
| 11/2006 | | Marco Schällibaum | MA | |||
| 10/2006 | | Frédéric Chassot | MA | |||
| 08/2006 | | Arnaud Bühler | DF |  | FC Sochaux | Sochaux |
| 08/2006 |  | Ahmed Yahiaoui | MF |  | FC Istres | FC Istres |
| 07/2006 |  | Kali | DF |  | FC Barreirense | FC Barreirense |
| 07/2006 | | Sofian Kheyari | DF |  | FC La Chaux-de-Fonds | La Chaux-de-Fon |
| 07/2006 |  | Carlitos | MF |  | Vitória Setúbal | Vitória FC |
| 07/2006 |  | Adel Chedli | MF |  | 1. FC Nuremberg | Nuremberg |
| 07/2006 | | Tariq Chihab | MF |  | Grasshopper Club Zürich | Grasshoppers |
| 07/2006 |  | Mohamed Diallo | MF |  | KSK Beveren | Beveren |
| 07/2006 | | Virgile Reset | MF |  | FC Lorient | Lorient |
| 07/2006 |  | Moustapha Dabo | FW | |||
| 07/2006 |  | Sanel Kuljić | FW |  | SV Ried | SV Ried |
| 07/2006 |  | Álvaro Saborío | FW |  | Deportivo Saprissa | Saprissa |
| 07/2006 |  | Néstor Clausen | MA |  | Oman Club | Oman Club |
| 07/2006 | | Marco Pascolo | GK-CO |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 02/2007 | | Mohamed Diallo | MF |  | Maccabi Petach-Tikva | Maccabi PT |
| 01/2007 | | Sébastien Meoli | DF |  | Yverdon Sport FC | Yverdon |
| 01/2007 | | Manuel Bühler | MF | | Yverdon Sport FC | Yverdon |
| 09/2006 |  | Javi Delgado | MF |  | Neuchâtel Xamax FCS | Xamax |
| 07/2006 | | Julien Fallet | MF |  | FC Baulmes | FC Baulmes |
| 07/2006 |  | Alex Leandro | FW |  | FC Unirea | FC Unirea |
| 07/2006 | | Paulo Vogt | FW |  | FK Stal Kamjanske | FK Stal |
| 07/2006 | | Marco Schneuwly | FW |  | SC Kriens | SC Kriens |
| 07/2006 | | Léonard Thurre | FW |  | FC Lausanne-Sport | FC Lausanne |