Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 01/2007 |  | Ivan Brozovic | DF |  | NK Bela Krajina | NK Bela Krajina |
| 01/2007 | | Plumb Jusufi | MF |  | Dinamo Zagreb U19 | Din. Zagreb U19 |
| 07/2006 |  | Vitor Júnior | FW |  | Dinamo Zagreb | Din. Zagreb |
| 07/2006 |  | Ermin Hasič | GK |  | SpVgg Unterhaching | U'haching |
| 07/2006 |  | Enes Handanagič | DF |  | ND Gorica | ND Gorica |
| 07/2006 | | Aleš Mejač | DF | | NK Bela Krajina | NK Bela Krajina |
| 07/2006 | | Ales Prus | DF | | ND Gorica | ND Gorica |
| 07/2006 | | Dalibor Starčević | DF |  | NK Istra 1961 | Istra 1961 |
| 07/2006 | | Marko Božič | MF |  | ND Mura 05 | ND Mura |
| 07/2006 | | Ivica Guberac | MF | |||
| 07/2006 |  | Nilton | MF |  | FC Penafiel | Penafiel |
| 07/2006 | | Aleš Puš | MF | | ND Gorica | ND Gorica |
| 07/2006 | | Aljko Rastoder | MF | |||
| 07/2006 | | Dario Zahora | FW | | Dinamo Zagreb | Din. Zagreb |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 01/2007 | | Mladen Rudonja | FW |  | Olimpija Ljubljana | Olimpija |
| 01/2007 | | Vitor Júnior | FW |  | Sport Recife - PE | SC Recife |
| 01/2007 | | Dario Zahora | FW |  | Slaven Belupo | Slaven |
| 10/2006 | | Dalibor Starčević | DF |  | HNK Rijeka | HNK Rijeka |
| 07/2006 | | Ivan Knezović | DF |  | NK Domžale | NK Domžale |
| 07/2006 | | Luka Škrbina | DF |  | NK Celje | NK Celje |
| 07/2006 | | Amir Karič | MF |  | Anorthosis Famagusta | Anorthosis |
| 07/2006 | | Erik Salkič | MF |  | Interblock Ljubljana | Interblock |
| 07/2006 | | Blaz Valencic | FW |  | SpVgg Weiden | Weiden |