Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 09/2003 |  | Darius Maciulevičius | MF |  | FK Vilnius | FK Vilnius |
| 09/2003 | | Eimantas Poderis | FW | | FK Vilnius | FK Vilnius |
| 08/2003 |  | Valeriy Stripeikis | FW |  | BATE Borisov | Borisov |
| 07/2003 | | Gytis Padimanskas | GK |  | FK Šiauliai | Šiauliai |
| 07/2003 | | Andrius Gedgaudas | MF |  | Spartak Yerevan | Spartak Yerevan |
| 07/2003 |  | Milan Pastva | MF |  | MŠK Rimavská Sobota | MŠK Rimavská Sobota |
| 07/2003 | | Ričardas Beniušis | FW |  | FK Atlantas | Atlantas |
| 07/2003 | | Siarhei Barouski | MA | |||
| 01/2003 | | Modestas Stonys | GK | |||
| 01/2003 | | Gvidas Grigas | DF |  | FK Sūduva | FK Sūduva |
| 01/2003 | | Dainius Kunevičius | DF | | FK Sūduva | FK Sūduva |
| 01/2003 | | Giedrius Barevičius | MF |  | FK Žalgiris | Žalgiris |
| 01/2003 | | Vadimas Petrenko | MF |  | Sigma Olomouc | Olomouc |
| 01/2003 | | Gintas Sirmelis | MF | |||
| 01/2003 | | Martynas Karalius | FW | | FK Atlantas | Atlantas |
| 01/2003 |  | Martin Opic | FW | |||
| 01/2003 | | Vitalis Stankevicius | FW | | FK Sūduva | FK Sūduva |
| 01/2003 | | Andrius Velička | FW |  | Anzhi Makhachkala | Anzhi |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 08/2003 | | Andrius Puotkalis | FW |  | Kauno Jegeriai | Kauno Jegeriai |
| 08/2003 | | Irmantas Zelmikas | DF | | Kauno Jegeriai | Kauno Jegeriai |
| 08/2003 | | Dainius Kunevičius | DF | | Kauno Jegeriai | Kauno Jegeriai |
| 08/2003 | | Andrius Velička | FW |  | Irtysh Pavlodar | Irtysh Pavlodar |
| 07/2003 | | Gvidas Grigas | DF | | FK Sūduva | FK Sūduva |
| 07/2003 | | Vitalijus Daniličevas | MF | | FK Šiauliai | Šiauliai |
| 01/2003 | | Gytis Gelgota | DF | | FK Sūduva | FK Sūduva |
| 01/2003 | | Mindaugas Pacevičius | DF |  | Utenis Utena | Utenis Utena |
| 01/2003 | | Remigijus Pocius | FW | | FK Žalgiris | Žalgiris |