Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 07/2012 |  | Aleksei Belov | FW |  | FC Flora | Flora |
| 07/2012 | | Kaarel Torop | FW | | FC Flora | Flora |
| 07/2012 | | Taavi Laurits | FW |  | FCI Levadia | Levadia |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 01/2013 | | Siim-Sten Palm | GK | | FC Flora | Flora |
| 01/2013 | | Joel Indermitte | DF |  | FC Kuressaare | Kuressaare |
| 01/2013 | | Gerdo Juhkam | DF |  | FC Flora II | FC Flora II |
| 01/2013 | | Marten Mütt | DF | | FC Flora | Flora |
| 01/2013 | | Martin Tšegodajev | DF |  | JK Tallinna Kalev | Kalev Tallinn |
| 01/2013 | | Sander Karu | MF | | JK Tallinna Kalev | Kalev Tallinn |
| 01/2013 | | Bert Klemmer | MF | | FC Kuressaare | Kuressaare |
| 01/2013 | | Sander Laht | MF | | FC Kuressaare | Kuressaare |
| 01/2013 | | Jaan Leimann | MF |  | Paide Linnameeskond | Paide |
| 01/2013 | | Elvis Liivamägi | MF | | JK Tallinna Kalev | Kalev Tallinn |
| 01/2013 | | Sander Sinilaid | MF | | FC Kuressaare | Kuressaare |
| 01/2013 | | Aleksei Belov | FW |  | SV Waren 09 | SV Waren 09 |
| 01/2013 | | Erkki Junolainen | FW | | FCI Levadia | Levadia |
| 01/2013 | | Kaarel Torop | FW |  | JK Tammeka | Tammeka |