Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 02/2013 |  | Peter Sládek | FW |  | 1. FC Slovácko | 1. FC Slovácko |
| 02/2013 | | Lukáš Pelegríni | MF | |||
| 02/2013 | | Peter Šulek | MF |  | MŠK Žilina | Žilina |
| 02/2013 | | Ľubomír Urgela | FW | |||
| 02/2013 |  | Erik Daniel | MF |  | Slovan Liberec | Sl. Liberec |
| 09/2012 | | Michal Šulla | GK |  | FK Senica | FK Senica |
| 09/2012 | | Zoltán Harsányi | FW |  | Pécsi MFC | Pécsi MFC |
| 08/2012 | | Matej Siva | DF |  | FK Teplice | FK Teplice |
| 07/2012 | | Matej Székely | GK |  | Spartak Trnava | Spartak Trnava |
| 07/2012 | | Peter Majerník | DF |  | SR Braşov | Brasov |
| 07/2012 | | Tomáš Mrva | DF |  | MFK Dolný Kubín | MFK Dolný Kubín |
| 07/2012 | | Marcel Onder | DF | |||
| 07/2012 | | Peter Ďuriš | MF |  | FK Slovan Nemšová | FK Slovan Nemšová |
| 07/2012 | | Marek Jastráb | MF | |||
| 07/2012 | | Peter Kuračka | MF | | Spartak Trnava | Spartak Trnava |
| 07/2012 | | Tomáš Marček | MF |  | AS Trenčín | AS Trenčín |
| 07/2012 | | Ján Petráš | MF | | Spartak Trnava | Spartak Trnava |
| 07/2012 | | Matúš Jorík | FW | |||
| 07/2012 | | Vladimír Kukoľ | FW |  | Zawisza Bydgoszcz | Bydgoszcz |
| 07/2012 | | Lukáš Šebek | FW | | AS Trenčín | AS Trenčín |
| 07/2012 | | Pavol Straka | FW | | AS Trenčín | AS Trenčín |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 01/2013 | | Michal Šulla | GK | | FK Senica | FK Senica |
| 01/2013 | | Lukáš Šebek | FW |  | SV Leobendorf | Leobendorf |
| 08/2012 | | Erik Sabo | MF | | Spartak Trnava | Spartak Trnava |