Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 05/2025 |  | Petr Husták | GK |  | FC Zlín B | FC Zlín B |
| 04/2025 | | Tomáš Hellebrand | MF | | FC Zlín B | FC Zlín B |
| 02/2025 | | Stanislav Petruța | MF | | FC Zlín B | FC Zlín B |
| 02/2025 | | Matěj Koubek | FW |  | FC Hradec Králové | Hradec Králové |
| 02/2025 |  | Tilen Ščernjavič | DF |  | NŠ Mura | NŠ Mura |
| 01/2025 |  | Stanley Kanu | FW |  | CS Marítimo B | CS Marítimo B |
| 07/2024 | | Miloš Kopečný | DF |  | SFC Opava | Opava |
| 07/2024 | | Patrik Brandner | FW | | FC Zlín B | FC Zlín B |
| 07/2024 | | Matěj Slouk | DF | | FC Zlín B | FC Zlín B |
| 07/2024 | | Lukáš Buchvaldek | MF |  | FK Dukla Praha | Dukla Praha |
| 07/2024 | | Dalyn Červinka | MF | | FC Zlín B | FC Zlín B |
| 07/2024 | | David Machalík | MF |  | Hanácká Slávia Kroměříž | Hanácká Slávia Kroměříž |
| 07/2024 | | Radek Ovesný | MF |  | MŠK Púchov | MŠK Púchov |
| 07/2024 | | Lukáš Branecký | FW | | FC Zlín B | FC Zlín B |
| 07/2024 | | Radim Hamalčík | FW | | FC Zlín B | FC Zlín B |
| 07/2024 | | Tomáš Poznar | FW |  | Spartak Trnava | Spartak Trnava |
| 07/2024 | | Martin Juřička | GK-CO |  | FC Zlín U17 | FC Zlín U17 |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 07/2024 | | Tomáš Čelůstka | DF |  | MFK Vyškov | MFK Vyškov |
| 07/2024 | | Filip Žák | FW |  | 1. SK Prostějov | 1. SK Prostějov |
| 07/2024 | | Kenneth Ikugar | FW |  | Sigma Olomouc B | Sigma Olomouc B |
| 07/2024 | | Martin Cedidla | DF |  | FK Jablonec | FK Jablonec |
| 07/2024 | | Libor Holík | DF | | Spartak Trnava | Spartak Trnava |
| 07/2024 |  | Selmir Pidro | DF |  | St. Louis City SC | St. Louis City |
| 07/2024 | | Alexandr Bužek | MF |  | Slavia Praha | Slavia Praha |
| 07/2024 | | Antonín Fantiš | MF |  | FC Voluntari | FC Voluntari |
| 07/2024 | | Jakub Janetzký | MF |  | FC Zbrojovka Brno | Zbrojovka Brno |
| 07/2024 |  | Pablo González | MF |  | Ethnikos Achna | Ethnikos Achna |
| 07/2024 | | Tom Slončík | MF |  | Viktoria Plzeň | Viktoria Plzeň |
| 07/2024 | | Libor Bobcik | FW |  | SpVgg Bayern Hof | Bayern Hof |
| 07/2024 | | Tomáš Schánělec | FW | | FK Jablonec | FK Jablonec |
| 07/2024 | | Otakar Novák | GK-CO |  | Sigma Olomouc | Olomouc |