Additions
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 11/2016 |  | Rokas Filipavičius | MF | |||
| 07/2016 | | Jonas Bičkus | MF | |||
| 07/2016 | | Neilas Urba | MF | |||
| 07/2016 |  | Andrey Panyukov | FW |  | AC Ajaccio | AC Ajaccio |
| 06/2016 | | Marius Adamonis | GK |  | AFC Bournemouth | Bournemouth |
| 04/2016 |  | Pascal Feindouno | MF |  | CS Sedan | CS Sedan |
| 03/2016 | | Evaldas Razulis | FW | |||
| 03/2016 | | Abdoul Karim Sylla | FW | |||
| 02/2016 | | Rimas Bogužas | GK | |||
| 01/2016 | | Vincentas Šarkauskas | GK | |||
| 01/2016 | | Povilas Valinčius | GK |  | FK Šiauliai | Šiauliai |
| 01/2016 | | Vytas Gašpuitis | DF | | FK Šiauliai | Šiauliai |
| 01/2016 | | Rokas Gedminas | MF | | FK Šiauliai | Šiauliai |
| 01/2016 | | Marius Papšys | MF |  | Klaipėdos Granitas | FK Klaipėdos |
| 01/2016 | | Domantas Šimkus | MF | |||
| 01/2016 | | Donatas Kazlauskas | FW |  | Olimpia Grudziądz | Olimpia Grudziądz |
Departures
| from | Name | Pos | Team | Team | ||
|---|---|---|---|---|---|---|
| 08/2016 | | Andrey Panyukov | FW |  | Sporting Braga B | Sporting Braga B |
| 07/2016 | | Edgaras Žarskis | DF |  | FK Jonava | Jonava |
| 04/2016 | | Robertas Vėževičius | FW |  | FC Stumbras | FC Stumbras |
| 03/2016 | | Rokas Petrikas | MF |  | FC Džiugas | FC Džiugas |
| 03/2016 | | Aurimas Jurgelevičius | DF |  | FK Palanga | FK Palanga |
| 02/2016 | | Lukas Baranauskas | FW | | FC Stumbras | FC Stumbras |
| 01/2016 | | Marius Adamonis | GK | | AFC Bournemouth | Bournemouth |
| 01/2016 | | Mindaugas Malinauskas | GK |  | Marijampolė City | Šilas |
| 01/2016 | | Dominykas Galkevičius | MF | | FK Jonava | Jonava |
| 01/2016 | | Julius Kasparavičius | FW |  | FK Šilutė | FK Šilutė |
| 01/2016 | | Simonas Urbys | FW | | FK Palanga | FK Palanga |